| Species: | Alistipes putredinis |
|---|---|
| Genus: | Alistipes |
| Family: | Rikenellaceae |
| Order: | Bacteroidales |
| Class: | Bacteroidia |
| Phylum: | Bacteroidetes |
| Disease Association: |
Renal cancer (ES=0.314389) |
|---|---|
| Region Enrichment: | European (Denmark, Germany, Italy, Luxembourg, Sweden, United Kingdom) |
| Shape | Rod-shaped |
|---|---|
| Gram staining | Gram- |
| Motility | Nonmotile |
| Oxygen Requirement | Anaerobe |
| Sporulation | Nonsporulating |
| Ecosystem | Human |
In the linked pathways:
red=enriched, blue=depleted
ko00010 - Glycolysis / Gluconeogenesis
ko00020 - Citrate cycle (TCA cycle)
ko00061 - Fatty acid biosynthesis
ko00130 - Ubiquinone and other terpenoid-quinone biosynthesis
ko00240 - Pyrimidine metabolism
ko00250 - Alanine, aspartate and glutamate metabolism
ko00260 - Glycine, serine and threonine metabolism
ko00300 - Lysine biosynthesis
ko00450 - Selenocompound metabolism
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00521 - Streptomycin biosynthesis
ko00540 - Lipopolysaccharide biosynthesis
ko00550 - Peptidoglycan biosynthesis
ko00670 - One carbon pool by folate
ko00710 - Carbon fixation in photosynthetic organisms
ko00730 - Thiamine metabolism
ko00740 - Riboflavin metabolism
ko00770 - Pantothenate and CoA biosynthesis
ko00785 - Lipoic acid metabolism
ko00970 - Aminoacyl-tRNA biosynthesis
ko00983 - Drug metabolism - other enzymes
ko03010 - Ribosome
ko03030 - DNA replication
ko03060 - Protein export
ko03410 - Base excision repair
ko03430 - Mismatch repair
ko03440 - Homologous recombination
M00002 - Glycolysis, core module involving three-carbon compounds
M00005 - PRPP biosynthesis, ribose 5P => PRPP
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
M00020 - Serine biosynthesis, glycerate-3P => serine
M00045 - Histidine degradation, histidine => N-formiminoglutamate => glutamate
M00048 - Inosine monophosphate biosynthesis, PRPP + glutamine => IMP
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00051 - Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP
M00060 - Lipopolysaccharide biosynthesis, KDO2-lipid A
M00063 - CMP-KDO biosynthesis
M00086 - beta-Oxidation, acyl-CoA synthesis
M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway
M00115 - NAD biosynthesis, aspartate => NAD
M00119 - Pantothenate biosynthesis, valine/L-aspartate => pantothenate
M00124 - Pyridoxal biosynthesis, erythrose-4P => pyridoxal-5P
M00144 - NADH
M00149 - Succinate dehydrogenase, prokaryotes
M00153 - Cytochrome bd ubiquinol oxidase
M00159 - V-type ATPase, prokaryotes
M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
M00565 - Trehalose biosynthesis, D-glucose 1P => trehalose
M00627 - beta-Lactam resistance, Bla system
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00642 - Multidrug resistance, efflux pump MexJK-OprM
M00705 - Multidrug resistance, efflux pump MepA
M00718 - Multidrug resistance, efflux pump MexAB-OprM
M00793 - dTDP-L-rhamnose biosynthesis
M00840 - Tetrahydrofolate biosynthesis, mediated by ribA and trpF, GTP => THF
M00843 - L-threo-Tetrahydrobiopterin biosynthesis, GTP => L-threo-BH4
M00854 - Glycogen biosynthesis, glucose-1P => glycogen/starch
Undetected
Undetected
Undetected
MATLAB species model file: msp_0090.mat
