| Species: | Bifidobacterium pseudocatenulatum |
|---|---|
| Genus: | Bifidobacterium |
| Family: | Bifidobacteriaceae |
| Order: | Bifidobacteriales |
| Class: | Actinobacteria |
| Phylum: | Actinobacteria |
| Disease Association: |
Ankylosing spondylitis (ES=0.582034) |
|---|---|
| Region Enrichment: | Mixed (Japan, Luxembourg, Mongolia) |
| Shape | Rod-shaped |
|---|---|
| Gram staining | Gram+ |
| Motility | Nonmotile |
| Oxygen Requirement | Anaerobe |
| Sporulation | Nonsporulating |
| Ecosystem | Human; Unclassified |
| Ecosystem Type | Unclassified |
In the linked pathways:
red=enriched, blue=depleted
ko00240 - Pyrimidine metabolism
ko00250 - Alanine, aspartate and glutamate metabolism
ko00270 - Cysteine and methionine metabolism
ko00290 - Valine, leucine and isoleucine biosynthesis
ko00300 - Lysine biosynthesis
ko00400 - Phenylalanine, tyrosine and tryptophan biosynthesis
ko00450 - Selenocompound metabolism
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00500 - Starch and sucrose metabolism
ko00521 - Streptomycin biosynthesis
ko00550 - Peptidoglycan biosynthesis
ko00660 - C5-Branched dibasic acid metabolism
ko00670 - One carbon pool by folate
ko00710 - Carbon fixation in photosynthetic organisms
ko00730 - Thiamine metabolism
ko00750 - Vitamin B6 metabolism
ko00770 - Pantothenate and CoA biosynthesis
ko00785 - Lipoic acid metabolism
ko00970 - Aminoacyl-tRNA biosynthesis
ko03010 - Ribosome
ko03030 - DNA replication
ko03060 - Protein export
ko03430 - Mismatch repair
ko03440 - Homologous recombination
M00002 - Glycolysis, core module involving three-carbon compounds
M00004 - Pentose phosphate pathway (Pentose phosphate cycle)
M00005 - PRPP biosynthesis, ribose 5P => PRPP
M00006 - Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
M00015 - Proline biosynthesis, glutamate => proline
M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
M00017 - Methionine biosynthesis, apartate => homoserine => methionine
M00018 - Threonine biosynthesis, aspartate => homoserine => threonine
M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
M00020 - Serine biosynthesis, glycerate-3P => serine
M00035 - Methionine degradation
M00048 - Inosine monophosphate biosynthesis, PRPP + glutamine => IMP
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00051 - Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP
M00053 - Pyrimidine deoxyribonuleotide biosynthesis, CDP/CTP => dCDP/dCTP,dTDP/dTTP
M00086 - beta-Oxidation, acyl-CoA synthesis
M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway
M00140 - C1-unit interconversion, prokaryotes
M00149 - Succinate dehydrogenase, prokaryotes
M00157 - F-type ATPase, prokaryotes and chloroplasts
M00365 - C10-C20 isoprenoid biosynthesis, archaea
M00432 - Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
M00549 - Nucleotide sugar biosynthesis, glucose => UDP-glucose
M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose
M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00700 - Multidrug resistance, efflux pump AbcA
M00704 - Tetracycline resistance, efflux pump Tet38
M00793 - dTDP-L-rhamnose biosynthesis
M00844 - Arginine biosynthesis, ornithine => arginine
M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine
Undetected
Undetected
Lanthipeptide
Other secondary metabolites
MATLAB species model file: msp_0138.mat
