| Species: | Klebsiella variicola |
|---|---|
| Genus: | Klebsiella |
| Family: | Enterobacteriaceae |
| Order: | Enterobacterales |
| Class: | Gammaproteobacteria |
| Phylum: | Proteobacteria |
| Gut outflow: | 1 |
|---|---|
| Region Enrichment: | Non-westernized (Fiji, India, Madagascar, Peru, Thailand) |
| Shape | Rod-shaped |
|---|---|
| Gram staining | Gram- |
| Motility | Motile; Nonmotile |
| Oxygen Requirement | Facultative |
| Ecosystem | Plants; Human; Fungi; Aquatic |
| Ecosystem Type | Unclassified; Rhizoplane; Respiratory system; Excretory system; Circulatory system |
In the linked pathways:
red=enriched, blue=depleted
ko00010 - Glycolysis / Gluconeogenesis
ko00020 - Citrate cycle (TCA cycle)
ko00030 - Pentose phosphate pathway
ko00040 - Pentose and glucuronate interconversions
ko00051 - Fructose and mannose metabolism
ko00052 - Galactose metabolism
ko00053 - Ascorbate and aldarate metabolism
ko00072 - Synthesis and degradation of ketone bodies
ko00130 - Ubiquinone and other terpenoid-quinone biosynthesis
ko00250 - Alanine, aspartate and glutamate metabolism
ko00260 - Glycine, serine and threonine metabolism
ko00270 - Cysteine and methionine metabolism
ko00281 - Geraniol degradation
ko00290 - Valine, leucine and isoleucine biosynthesis
ko00300 - Lysine biosynthesis
ko00360 - Phenylalanine metabolism
ko00362 - Benzoate degradation
ko00364 - Fluorobenzoate degradation
ko00450 - Selenocompound metabolism
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00480 - Glutathione metabolism
ko00500 - Starch and sucrose metabolism
ko00521 - Streptomycin biosynthesis
ko00540 - Lipopolysaccharide biosynthesis
ko00550 - Peptidoglycan biosynthesis
ko00620 - Pyruvate metabolism
ko00622 - Xylene degradation
ko00630 - Glyoxylate and dicarboxylate metabolism
ko00640 - Propanoate metabolism
ko00643 - Styrene degradation
ko00660 - C5-Branched dibasic acid metabolism
ko00670 - One carbon pool by folate
ko00710 - Carbon fixation in photosynthetic organisms
ko00730 - Thiamine metabolism
ko00740 - Riboflavin metabolism
ko00750 - Vitamin B6 metabolism
ko00770 - Pantothenate and CoA biosynthesis
ko00780 - Biotin metabolism
ko00785 - Lipoic acid metabolism
ko00790 - Folate biosynthesis
ko00910 - Nitrogen metabolism
ko00920 - Sulfur metabolism
ko00970 - Aminoacyl-tRNA biosynthesis
ko00983 - Drug metabolism - other enzymes
ko02010 - ABC transporters
ko02060 - Phosphotransferase system (PTS)
ko03070 - Bacterial secretion system
ko03410 - Base excision repair
ko03430 - Mismatch repair
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00008 - Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
M00012 - Glyoxylate cycle
M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
M00017 - Methionine biosynthesis, apartate => homoserine => methionine
M00018 - Threonine biosynthesis, aspartate => homoserine => threonine
M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
M00020 - Serine biosynthesis, glycerate-3P => serine
M00021 - Cysteine biosynthesis, serine => cysteine
M00045 - Histidine degradation, histidine => N-formiminoglutamate => glutamate
M00060 - Lipopolysaccharide biosynthesis, KDO2-lipid A
M00061 - D-Glucuronate degradation
M00063 - CMP-KDO biosynthesis
M00064 - ADP-L-glycero-D-manno-heptose biosynthesis
M00086 - beta-Oxidation, acyl-CoA synthesis
M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
M00115 - NAD biosynthesis, aspartate => NAD
M00116 - Menaquinone biosynthesis, chorismate => menaquinol
M00117 - Ubiquinone biosynthesis, prokaryotes, chorismate => ubiquinone
M00119 - Pantothenate biosynthesis, valine/L-aspartate => pantothenate
M00121 - Heme biosynthesis, glutamate => heme
M00123 - Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
M00124 - Pyridoxal biosynthesis, erythrose-4P => pyridoxal-5P
M00134 - Polyamine biosynthesis, arginine => ornithine => putrescine
M00136 - GABA biosynthesis, prokaryotes, putrescine => GABA
M00153 - Cytochrome bd ubiquinol oxidase
M00364 - C10-C20 isoprenoid biosynthesis, bacteria
M00365 - C10-C20 isoprenoid biosynthesis, archaea
M00432 - Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
M00537 - Xylene degradation, xylene => methylbenzoate
M00550 - Ascorbate degradation, ascorbate => D-xylulose-5P
M00551 - Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
M00552 - D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose
M00568 - Catechol ortho-cleavage, catechol => 3-oxoadipate
M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
M00573 - Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin
M00577 - Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin
M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00642 - Multidrug resistance, efflux pump MexJK-OprM
M00696 - Multidrug resistance, efflux pump AcrEF-TolC
M00714 - Multidrug resistance, efflux pump QacA
M00718 - Multidrug resistance, efflux pump MexAB-OprM
M00745 - Imipenem resistance, repression of porin OprD
M00761 - Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N
M00793 - dTDP-L-rhamnose biosynthesis
M00844 - Arginine biosynthesis, ornithine => arginine
M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine
Adherence
Adhesion
Biofilm
Cell motility
Cell surface and membrane proteins
Cell-to-cell spread
Cellular metabolism
Chaperone
Drug efflux system
Intracellular survival and replication
Invasion
Lps (lipopolysaccharide)
Regulation of gene expression
Two-component system
Virulence
3'-to-5' exoribonuclease RNase R (ID:S4602)
ATP-dependent helicase HrpA (ID:Z2313)
BarA-associated response regulator UvrY (= GacA = SirA) (ID:SL1344_1877)
Biosynthetic arginine decarboxylase (EC 4.1.1.19) (ID:Z4283)
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (ID:Z0038)
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (ID:Z0037)
Carbon starvation protein A (ID:SL1344_0588)
CFA/I fimbrial major subunit (ID:Z0360)
Chaperone protein FimC (ID:c5395)
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (ID:Z4251)
D-sedoheptulose 7-phosphate isomerase (EC 5.3.1.28) (ID:SL1344_0306)
Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1), subgroup 1 (ID:SL1344_0209)
Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) @ Dipeptide chemoreceptor (ID:c4361)
DNA polymerase IV (EC 2.7.7.7) (ID:SL1344_0309)
DNA-binding transcriptional dual regulator SoxS (ID:STM14_5127)
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) (ID:Z4136)
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) (ID:STM3453)
GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2) (ID:S2725)
GTP-binding and nucleic acid-binding protein YchF (ID:c1661)
Homoserine O-succinyltransferase (EC 2.3.1.46) (ID:SL1344_4117)
HtrA protease/chaperone protein (ID:SF660363_0094)
Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I (ID:SG2866)
Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain (ID:STM2511)
Lipid A biosynthesis myristoyltransferase (EC 2.3.1.243) (ID:SFK218_2097)
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (ID:SL1344_1747)
Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) (ID:SL1344_3451)
Multidrug efflux pump MdfA/Cmr (of MFS type), broad spectrum (ID:STM14_1016)
N,N'-diacetylchitobiose-specific 6-phospho-beta-glucosidase (EC 3.2.1.86) (ID:STM474_1321)
Osmolarity sensory histidine kinase EnvZ (ID:STM14_4216)
Outer membrane protein A precursor (ID:c1093)
Outer-membrane-phospholipid-binding lipoprotein MlaA (ID:S2559)
Periplasmic beta-glucosidase (EC 3.2.1.21) (ID:SL1344_2144)
Periplasmic chaperone and peptidyl-prolyl cis-trans isomerase of outer membrane proteins SurA (EC 5.2.1.8) (ID:SF0050)
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation (ID:c1633)
Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (ID:STM14_5016)
Protein MtfA (ID:STM474_2081)
PTS system, galactitol-specific IIC component (ID:b2092)
PTS system, N,N'-diacetylchitobiose-specific IIB component (EC 2.7.1.196) (ID:SL1344_1247)
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) (ID:STM474_0956)
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) (ID:b1224)
Sensor histidine kinase PhoQ (EC 2.7.13.3) (ID:STM14_1408)
Signal transduction histidine-protein kinase BarA (EC 2.7.13.3) (ID:SL1344_2939)
Stress response diiron-containing protein YciF (ID:STM474_1746)
Translation initiation factor SUI1-related protein (ID:SL1344_1638)
Trk potassium uptake system protein TrkA (ID:Z4660)
Type 1 fimbriae regulatory protein FimB (ID:c5391)
Type 1 fimbriae regulatory protein FimE (ID:c5392)
Type IV pilin PilA (ID:Z0118)
Type-1 fimbrial protein, A chain (ID:Z5912)
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191) (ID:STM0226)
Uncharacterized protein YjaG (ID:SL1344_4108)
UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (ID:S1322)
UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (ID:SL1344_2075)
Zinc ABC transporter, ATP-binding protein ZnuC (ID:STM14_2301)
Zinc ABC transporter, permease protein ZnuB (ID:STM14_2302)
Undetected
