| Species: | [Ruminococcaceae] bacterium CIM:MAG 1403 |
|---|---|
| Genus: | unclassified Clostridiales 4 |
| Family: | unclassified Clostridiales 4 |
| Order: | Clostridiales |
| Class: | Clostridia |
| Phylum: | Firmicutes |
| Region Enrichment: | Mixed (Fiji, Madagascar, Mongolia, Peru, Spain, United Republic of Tanzania) |
|---|
In the linked pathways:
red=enriched, blue=depleted
ko00061 - Fatty acid biosynthesis
ko00250 - Alanine, aspartate and glutamate metabolism
ko00300 - Lysine biosynthesis
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00511 - Other glycan degradation
ko00550 - Peptidoglycan biosynthesis
ko00670 - One carbon pool by folate
ko00710 - Carbon fixation in photosynthetic organisms
ko00730 - Thiamine metabolism
ko00770 - Pantothenate and CoA biosynthesis
ko00780 - Biotin metabolism
ko00970 - Aminoacyl-tRNA biosynthesis
ko03010 - Ribosome
ko03030 - DNA replication
ko03060 - Protein export
ko03430 - Mismatch repair
ko03440 - Homologous recombination
M00002 - Glycolysis, core module involving three-carbon compounds
M00005 - PRPP biosynthesis, ribose 5P => PRPP
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
M00015 - Proline biosynthesis, glutamate => proline
M00018 - Threonine biosynthesis, aspartate => homoserine => threonine
M00020 - Serine biosynthesis, glycerate-3P => serine
M00021 - Cysteine biosynthesis, serine => cysteine
M00035 - Methionine degradation
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00051 - Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP
M00061 - D-Glucuronate degradation
M00086 - beta-Oxidation, acyl-CoA synthesis
M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway
M00140 - C1-unit interconversion, prokaryotes
M00159 - V-type ATPase, prokaryotes
M00308 - Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P
M00338 - Cysteine biosynthesis, homocysteine + serine => cysteine
M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose
M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00705 - Multidrug resistance, efflux pump MepA
M00844 - Arginine biosynthesis, ornithine => arginine
M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine
Undetected
Undetected
Undetected
MATLAB species model file: msp_0521.mat
