Species: | Enterobacter kobei |
---|---|
Genus: | Enterobacter |
Family: | Enterobacteriaceae |
Order: | Enterobacterales |
Class: | Gammaproteobacteria |
Phylum: | Proteobacteria |
Gut outflow: | 1 |
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Region Enrichment: | Fiji, Thailand |
Shape | Rod-shaped |
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Gram staining | Gram- |
Motility | Motile |
Oxygen Requirement | Facultative |
Sporulation | Sporulating |
Ecosystem | Human |
Ecosystem Type | Circulatory system; Respiratory system; Excretory system |
In the linked pathways:
red=enriched, blue=depleted
ko00010 - Glycolysis / Gluconeogenesis
ko00030 - Pentose phosphate pathway
ko00040 - Pentose and glucuronate interconversions
ko00051 - Fructose and mannose metabolism
ko00052 - Galactose metabolism
ko00053 - Ascorbate and aldarate metabolism
ko00061 - Fatty acid biosynthesis
ko00072 - Synthesis and degradation of ketone bodies
ko00130 - Ubiquinone and other terpenoid-quinone biosynthesis
ko00230 - Purine metabolism
ko00240 - Pyrimidine metabolism
ko00250 - Alanine, aspartate and glutamate metabolism
ko00260 - Glycine, serine and threonine metabolism
ko00270 - Cysteine and methionine metabolism
ko00281 - Geraniol degradation
ko00290 - Valine, leucine and isoleucine biosynthesis
ko00300 - Lysine biosynthesis
ko00330 - Arginine and proline metabolism
ko00410 - beta-Alanine metabolism
ko00450 - Selenocompound metabolism
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00480 - Glutathione metabolism
ko00500 - Starch and sucrose metabolism
ko00520 - Amino sugar and nucleotide sugar metabolism
ko00521 - Streptomycin biosynthesis
ko00540 - Lipopolysaccharide biosynthesis
ko00550 - Peptidoglycan biosynthesis
ko00620 - Pyruvate metabolism
ko00650 - Butanoate metabolism
ko00670 - One carbon pool by folate
ko00710 - Carbon fixation in photosynthetic organisms
ko00730 - Thiamine metabolism
ko00740 - Riboflavin metabolism
ko00750 - Vitamin B6 metabolism
ko00770 - Pantothenate and CoA biosynthesis
ko00780 - Biotin metabolism
ko00785 - Lipoic acid metabolism
ko00790 - Folate biosynthesis
ko00791 - Atrazine degradation
ko00910 - Nitrogen metabolism
ko00920 - Sulfur metabolism
ko00970 - Aminoacyl-tRNA biosynthesis
ko00983 - Drug metabolism - other enzymes
ko02010 - ABC transporters
ko02020 - Two-component system
ko02030 - Bacterial chemotaxis
ko02040 - Flagellar assembly
ko02060 - Phosphotransferase system (PTS)
ko03030 - DNA replication
ko03070 - Bacterial secretion system
ko03410 - Base excision repair
ko03430 - Mismatch repair
ko03440 - Homologous recombination
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00015 - Proline biosynthesis, glutamate => proline
M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
M00017 - Methionine biosynthesis, apartate => homoserine => methionine
M00018 - Threonine biosynthesis, aspartate => homoserine => threonine
M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
M00020 - Serine biosynthesis, glycerate-3P => serine
M00021 - Cysteine biosynthesis, serine => cysteine
M00048 - Inosine monophosphate biosynthesis, PRPP + glutamine => IMP
M00060 - Lipopolysaccharide biosynthesis, KDO2-lipid A
M00061 - D-Glucuronate degradation
M00063 - CMP-KDO biosynthesis
M00064 - ADP-L-glycero-D-manno-heptose biosynthesis
M00086 - beta-Oxidation, acyl-CoA synthesis
M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway
M00117 - Ubiquinone biosynthesis, prokaryotes, chorismate => ubiquinone
M00119 - Pantothenate biosynthesis, valine/L-aspartate => pantothenate
M00121 - Heme biosynthesis, glutamate => heme
M00124 - Pyridoxal biosynthesis, erythrose-4P => pyridoxal-5P
M00127 - Thiamine biosynthesis, AIR => thiamine-P/thiamine-2P
M00133 - Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
M00134 - Polyamine biosynthesis, arginine => ornithine => putrescine
M00136 - GABA biosynthesis, prokaryotes, putrescine => GABA
M00150 - Fumarate reductase, prokaryotes
M00153 - Cytochrome bd ubiquinol oxidase
M00176 - Assimilatory sulfate reduction, sulfate => H2S
M00364 - C10-C20 isoprenoid biosynthesis, bacteria
M00365 - C10-C20 isoprenoid biosynthesis, archaea
M00432 - Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
M00533 - Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate
M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
M00549 - Nucleotide sugar biosynthesis, glucose => UDP-glucose
M00550 - Ascorbate degradation, ascorbate => D-xylulose-5P
M00552 - D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose
M00565 - Trehalose biosynthesis, D-glucose 1P => trehalose
M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
M00572 - Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
M00631 - D-Galacturonate degradation (bacteria)
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00642 - Multidrug resistance, efflux pump MexJK-OprM
M00649 - Multidrug resistance, efflux pump AdeABC
M00696 - Multidrug resistance, efflux pump AcrEF-TolC
M00704 - Tetracycline resistance, efflux pump Tet38
M00714 - Multidrug resistance, efflux pump QacA
M00718 - Multidrug resistance, efflux pump MexAB-OprM
M00745 - Imipenem resistance, repression of porin OprD
M00761 - Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N
M00844 - Arginine biosynthesis, ornithine => arginine
M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine
M00846 - Siroheme biosynthesis, glutamate => siroheme
Adhesion
Biofilm
Cell surface and membrane proteins
Cell-to-cell spread
Chaperone
Defense against host immune response
Drug efflux system
Fimbriae
Intracellular survival and replication
Invasion
Regulation of gene expression
Two-component system
Virulence
Zinc uptake
16 kDa heat shock protein B (ID:c4606)
2-ketobutyrate formate-lyase (EC 2.3.1.-) @ Pyruvate formate-lyase (EC 2.3.1.54) (ID:Z4466)
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase (EC 2.3.1.245) (ID:SL1344_4027)
3'-to-5' exoribonuclease RNase R (ID:S4602)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) (ID:STM474_3165)
ATP-dependent helicase HrpA (ID:Z2313)
BarA-associated response regulator UvrY (= GacA = SirA) (ID:SL1344_1877)
Biosynthetic arginine decarboxylase (EC 4.1.1.19) (ID:Z4283)
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (ID:Z0038)
Carbon starvation protein A (ID:SL1344_0588)
Colanic acid biosynthesis glycosyl transferase WcaE (ID:STM474_2196)
Curli production assembly/transport component CsgE (ID:STM1141)
Curli production assembly/transport component CsgF (ID:SL1344_1077)
Curli production assembly/transport component CsgG (ID:STM14_1303)
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (ID:Z4251)
D-sedoheptulose 7-phosphate isomerase (EC 5.3.1.28) (ID:SL1344_0306)
Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1), subgroup 1 (ID:SL1344_0209)
DNA polymerase IV (EC 2.7.7.7) (ID:SL1344_0309)
DTDP-4-amino-4,6-dideoxygalactose transaminase (EC 2.6.1.59) (ID:c4711)
FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) (ID:SL1344_0257)
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) (ID:STM3453)
Galactose/methyl galactoside ABC transporter, ATP-binding protein MglA (EC 3.6.3.17) (ID:Z3404)
GDP-L-fucose synthetase (EC 1.1.1.271) (ID:Z3197)
Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) (ID:SL1344_1828)
Homoserine O-succinyltransferase (EC 2.3.1.46) (ID:SL1344_4117)
HtrA protease/chaperone protein (ID:SF660363_0094)
Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I (ID:SG2866)
Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain (ID:STM2511)
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (ID:SL1344_1747)
Maltodextrin ABC transporter, ATP-binding protein MsmX (ID:Z2463)
Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) (ID:SL1344_3451)
Multidrug efflux pump MdfA/Cmr (of MFS type), broad spectrum (ID:STM14_1016)
N,N'-diacetylchitobiose-specific 6-phospho-beta-glucosidase (EC 3.2.1.86) (ID:STM474_1321)
Na+/H+-dicarboxylate symporter (ID:Z4942)
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) (ID:STM2323.S)
Osmolarity sensory histidine kinase EnvZ (ID:STM14_4216)
Outer membrane porin OmpD (ID:SL1344_1503)
Outer-membrane-phospholipid-binding lipoprotein MlaA (ID:S2559)
Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) (ID:SL1344_3870)
Periplasmic beta-glucosidase (EC 3.2.1.21) (ID:SL1344_2144)
Periplasmic chaperone and peptidyl-prolyl cis-trans isomerase of outer membrane proteins SurA (EC 5.2.1.8) (ID:SF0050)
Phosphate transport system regulatory protein PhoU (ID:c4648)
Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (ID:STM14_5016)
Probable endopeptidase NlpC (ID:SL1344_1277)
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) (ID:STM474_0956)
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) (ID:b1224)
SbmA protein (ID:c0482)
Sensor histidine kinase PhoQ (EC 2.7.13.3) (ID:STM14_1408)
Signal transduction histidine-protein kinase BarA (EC 2.7.13.3) (ID:SL1344_2939)
Spermidine export protein MdtJ (ID:SL1344_1412)
Threonine catabolic operon transcriptional activator TdcA (ID:SL1344_3217)
TonB-dependent receptor; Outer membrane receptor for ferric enterobactin and colicins B, D (ID:STM14_0682)
Transcriptional regulatory protein PhoP (ID:SF1149)
Transketolase (EC 2.2.1.1) (ID:c3520)
Trk potassium uptake system protein TrkA (ID:Z4660)
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191) (ID:STM0226)
UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (ID:SL1344_2057)
Uncharacterized protease YegQ (ID:SL1344_2112)
Uncharacterized protein YjaG (ID:SL1344_4108)
UPF0187 protein YneE (ID:STM474_1538)
UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (ID:S1322)
UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (ID:SL1344_2075)
Zinc ABC transporter, substrate-binding protein ZnuA (ID:STM14_2300)
Undetected