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unclassified Muribaculaceae

Taxonomy

Species:unclassified Muribaculaceae
Genus:unclassified Muribaculaceae
Family:Muribaculaceae
Order:Bacteroidales
Class:Bacteroidia
Phylum:Bacteroidetes

 

Region Enrichment:Thailand

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00020 - Citrate cycle (TCA cycle)

ko00061 - Fatty acid biosynthesis

ko00240 - Pyrimidine metabolism

ko00250 - Alanine, aspartate and glutamate metabolism

ko00300 - Lysine biosynthesis

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00521 - Streptomycin biosynthesis

ko00540 - Lipopolysaccharide biosynthesis

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00710 - Carbon fixation in photosynthetic organisms

ko00730 - Thiamine metabolism

ko00740 - Riboflavin metabolism

ko00770 - Pantothenate and CoA biosynthesis

ko00785 - Lipoic acid metabolism

ko00791 - Atrazine degradation

ko00970 - Aminoacyl-tRNA biosynthesis

ko00983 - Drug metabolism - other enzymes

ko03010 - Ribosome

ko03030 - DNA replication

ko03060 - Protein export

ko03430 - Mismatch repair

ko03440 - Homologous recombination

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KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

M00020 - Serine biosynthesis, glycerate-3P => serine

M00045 - Histidine degradation, histidine => N-formiminoglutamate => glutamate

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00051 - Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP

M00060 - Lipopolysaccharide biosynthesis, KDO2-lipid A

M00063 - CMP-KDO biosynthesis

M00086 - beta-Oxidation, acyl-CoA synthesis

M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE

M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway

M00115 - NAD biosynthesis, aspartate => NAD

M00116 - Menaquinone biosynthesis, chorismate => menaquinol

M00119 - Pantothenate biosynthesis, valine/L-aspartate => pantothenate

M00124 - Pyridoxal biosynthesis, erythrose-4P => pyridoxal-5P

M00127 - Thiamine biosynthesis, AIR => thiamine-P/thiamine-2P

M00144 - NADH

M00149 - Succinate dehydrogenase, prokaryotes

M00153 - Cytochrome bd ubiquinol oxidase

M00157 - F-type ATPase, prokaryotes and chloroplasts

M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00565 - Trehalose biosynthesis, D-glucose 1P => trehalose

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00642 - Multidrug resistance, efflux pump MexJK-OprM

M00696 - Multidrug resistance, efflux pump AcrEF-TolC

M00705 - Multidrug resistance, efflux pump MepA

M00718 - Multidrug resistance, efflux pump MexAB-OprM

M00793 - dTDP-L-rhamnose biosynthesis

M00840 - Tetrahydrofolate biosynthesis, mediated by ribA and trpF, GTP => THF

M00843 - L-threo-Tetrahydrobiopterin biosynthesis, GTP => L-threo-BH4

M00854 - Glycogen biosynthesis, glucose-1P => glycogen/starch

M00855 - Glycogen degradation, glycogen => glucose-6P

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Antibiotic resistance

tetM

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_0888.mat