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Candidatus Methanomassiliicoccus intestinalis

Taxonomy

Image of organism in genus Candidatus Methanomassiliicoccus intestinalis
Species:Candidatus Methanomassiliicoccus intestinalis
Genus:Methanomassiliicoccus
Family:Methanomassiliicoccaceae
Order:Methanomassiliicoccales
Class:Thermoplasmata
Phylum:Euryarchaeota

 

Phenotypes

EcosystemAnimal

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00020 - Citrate cycle (TCA cycle)

ko00072 - Synthesis and degradation of ketone bodies

ko00250 - Alanine, aspartate and glutamate metabolism

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00300 - Lysine biosynthesis

ko00521 - Streptomycin biosynthesis

ko00633 - Nitrotoluene degradation

ko00670 - One carbon pool by folate

ko00680 - Methane metabolism

ko00710 - Carbon fixation in photosynthetic organisms

ko00720 - Carbon fixation pathways in prokaryotes

ko00730 - Thiamine metabolism

ko00770 - Pantothenate and CoA biosynthesis

ko00785 - Lipoic acid metabolism

ko00791 - Atrazine degradation

ko00860 - Porphyrin and chlorophyll metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko03010 - Ribosome

ko03030 - DNA replication

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KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

M00015 - Proline biosynthesis, glutamate => proline

M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine

M00018 - Threonine biosynthesis, aspartate => homoserine => threonine

M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

M00020 - Serine biosynthesis, glycerate-3P => serine

M00021 - Cysteine biosynthesis, serine => cysteine

M00048 - Inosine monophosphate biosynthesis, PRPP + glutamine => IMP

M00049 - Adenine ribonucleotide biosynthesis, IMP => ADP,ATP

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00051 - Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP

M00095 - C5 isoprenoid biosynthesis, mevalonate pathway

M00115 - NAD biosynthesis, aspartate => NAD

M00119 - Pantothenate biosynthesis, valine/L-aspartate => pantothenate

M00127 - Thiamine biosynthesis, AIR => thiamine-P/thiamine-2P

M00140 - C1-unit interconversion, prokaryotes

M00144 - NADH

M00159 - V-type ATPase, prokaryotes

M00356 - Methanogenesis, methanol => methane

M00364 - C10-C20 isoprenoid biosynthesis, bacteria

M00365 - C10-C20 isoprenoid biosynthesis, archaea

M00377 - Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway)

M00432 - Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate

M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine

M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine

M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate

M00563 - Methanogenesis, methylamine/dimethylamine/trimethylamine

M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine

M00580 - Pentose phosphate pathway, archaea, fructose 6P => ribose 5P

M00620 - Incomplete reductive citrate cycle, acetyl-CoA => oxoglutarate

M00705 - Multidrug resistance, efflux pump MepA

M00793 - dTDP-L-rhamnose biosynthesis

M00836 - Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430

M00844 - Arginine biosynthesis, ornithine => arginine

M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine

M00849 - C5 isoprenoid biosynthesis, mevalonate pathway, archaea

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Cazyme

GT2

GT20

GT4

PL9

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Antibiotic resistance

Undetected

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_0896.mat