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unclassified Oscillospiraceae

Taxonomy

Species:unclassified Oscillospiraceae
Genus:unclassified Oscillospiraceae
Family:Oscillospiraceae
Order:Clostridiales
Class:Clostridia
Phylum:Firmicutes

 

Gut outflow:0.571

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00250 - Alanine, aspartate and glutamate metabolism

ko00260 - Glycine, serine and threonine metabolism

ko00270 - Cysteine and methionine metabolism

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00300 - Lysine biosynthesis

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00785 - Lipoic acid metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko00983 - Drug metabolism - other enzymes

ko03430 - Mismatch repair

ko03440 - Homologous recombination

Show all

KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine

M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

M00021 - Cysteine biosynthesis, serine => cysteine

M00159 - V-type ATPase, prokaryotes

M00308 - Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P

M00377 - Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway)

M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine

M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00705 - Multidrug resistance, efflux pump MepA

M00844 - Arginine biosynthesis, ornithine => arginine

M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine

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Antibiotic resistance

tetM

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1030.mat