| Species: | unclassified Roseburia |
|---|---|
| Genus: | Roseburia |
| Family: | Lachnospiraceae |
| Order: | Clostridiales |
| Class: | Clostridia |
| Phylum: | Firmicutes |
| Region Enrichment: | Non-westernized (Madagascar, Peru, United Republic of Tanzania) |
|---|
In the linked pathways:
red=enriched, blue=depleted
ko00250 - Alanine, aspartate and glutamate metabolism
ko00290 - Valine, leucine and isoleucine biosynthesis
ko00300 - Lysine biosynthesis
ko00450 - Selenocompound metabolism
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00521 - Streptomycin biosynthesis
ko00550 - Peptidoglycan biosynthesis
ko00670 - One carbon pool by folate
ko00730 - Thiamine metabolism
ko00770 - Pantothenate and CoA biosynthesis
ko02030 - Bacterial chemotaxis
ko02040 - Flagellar assembly
ko03430 - Mismatch repair
ko03440 - Homologous recombination
M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
M00026 - Histidine biosynthesis, PRPP => histidine
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00061 - D-Glucuronate degradation
M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway
M00119 - Pantothenate biosynthesis, valine/L-aspartate => pantothenate
M00122 - Cobalamin biosynthesis, cobinamide => cobalamin
M00134 - Polyamine biosynthesis, arginine => ornithine => putrescine
M00159 - V-type ATPase, prokaryotes
M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose
M00565 - Trehalose biosynthesis, D-glucose 1P => trehalose
M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
M00596 - Dissimilatory sulfate reduction, sulfate => H2S
M00627 - beta-Lactam resistance, Bla system
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00705 - Multidrug resistance, efflux pump MepA
M00793 - dTDP-L-rhamnose biosynthesis
Undetected
Undetected
Undetected
MATLAB species model file: msp_1055.mat
