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Peptoniphilus lacrimalis

Taxonomy

Image of organism in genus Peptoniphilus lacrimalis
Species:Peptoniphilus lacrimalis
Genus:Peptoniphilus
Family:Peptoniphilaceae
Order:Tissierellales
Class:Tissierellia
Phylum:Firmicutes

 

Gut outflow:1

Phenotypes

ShapeCoccus-shaped
Gram stainingGram+
Oxygen RequirementAnaerobe
EcosystemHuman
Ecosystem TypeReproductive system; Unclassified; Excretory system

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00061 - Fatty acid biosynthesis

ko00240 - Pyrimidine metabolism

ko00450 - Selenocompound metabolism

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00710 - Carbon fixation in photosynthetic organisms

ko00730 - Thiamine metabolism

ko00780 - Biotin metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko00983 - Drug metabolism - other enzymes

ko03010 - Ribosome

ko03030 - DNA replication

ko03060 - Protein export

ko03430 - Mismatch repair

ko03440 - Homologous recombination

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KEGG modules

M00002 - Glycolysis, core module involving three-carbon compounds

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

M00015 - Proline biosynthesis, glutamate => proline

M00018 - Threonine biosynthesis, aspartate => homoserine => threonine

M00021 - Cysteine biosynthesis, serine => cysteine

M00045 - Histidine degradation, histidine => N-formiminoglutamate => glutamate

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00082 - Fatty acid biosynthesis, initiation

M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway

M00115 - NAD biosynthesis, aspartate => NAD

M00123 - Biotin biosynthesis, pimeloyl-ACP/CoA => biotin

M00134 - Polyamine biosynthesis, arginine => ornithine => putrescine

M00140 - C1-unit interconversion, prokaryotes

M00159 - V-type ATPase, prokaryotes

M00364 - C10-C20 isoprenoid biosynthesis, bacteria

M00365 - C10-C20 isoprenoid biosynthesis, archaea

M00573 - Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin

M00577 - Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00705 - Multidrug resistance, efflux pump MepA

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Cazyme

Antibiotic resistance

Undetected

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1057c.mat