GEOGRAPHY SPECIES DISEASES ABOUT DOWNLOADS

Clostridiales bacterium UBA643

Taxonomy

Species:Clostridiales bacterium UBA643
Genus:unclassified Clostridiales Family XIII. Incertae Sedis
Family:Clostridiales Family XIII. Incertae Sedis
Order:unclassified Tissierellia 3
Class:Tissierellia 3
Phylum:Firmicutes

 

Disease Association:

Colorectal cancer (ES=0.307954)

Region Enrichment:Non-westernized
(Fiji, Madagascar, Mongolia, Peru, United Republic of Tanzania)

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00061 - Fatty acid biosynthesis

ko00250 - Alanine, aspartate and glutamate metabolism

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00710 - Carbon fixation in photosynthetic organisms

ko00785 - Lipoic acid metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko03010 - Ribosome

ko03430 - Mismatch repair

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KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

M00020 - Serine biosynthesis, glycerate-3P => serine

M00021 - Cysteine biosynthesis, serine => cysteine

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00086 - beta-Oxidation, acyl-CoA synthesis

M00115 - NAD biosynthesis, aspartate => NAD

M00134 - Polyamine biosynthesis, arginine => ornithine => putrescine

M00159 - V-type ATPase, prokaryotes

M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine

M00705 - Multidrug resistance, efflux pump MepA

M00793 - dTDP-L-rhamnose biosynthesis

M00844 - Arginine biosynthesis, ornithine => arginine

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Cazyme

GH25

GH53

GT2

GT28

GT51

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Antibiotic resistance

sul

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1293.mat