GEOGRAPHY SPECIES DISEASES ABOUT DOWNLOADS

Agathobaculum sp. Marseille-P4005

Taxonomy

Species:Agathobaculum sp. Marseille-P4005
Genus:Agathobaculum
Family:unclassified Clostridiales 5
Order:Clostridiales
Class:Clostridia
Phylum:Firmicutes

 

Gut outflow:0.75
Disease Association:

Healthy (ES=0.377942)

Type 1 diabetes (ES=0.335358)

Region Enrichment:Westernized
(Austria, Denmark, France, Germany, Italy, Japan, Luxembourg, Spain, Sweden)

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00473 - D-Alanine metabolism

ko00670 - One carbon pool by folate

ko00970 - Aminoacyl-tRNA biosynthesis

ko02030 - Bacterial chemotaxis

ko02040 - Flagellar assembly

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KEGG modules

M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

M00020 - Serine biosynthesis, glycerate-3P => serine

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00061 - D-Glucuronate degradation

M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00565 - Trehalose biosynthesis, D-glucose 1P => trehalose

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00631 - D-Galacturonate degradation (bacteria)

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00705 - Multidrug resistance, efflux pump MepA

M00844 - Arginine biosynthesis, ornithine => arginine

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Antibiotic resistance

Undetected

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1381.mat