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unclassified Ruminococcaceae

Taxonomy

Species:unclassified Ruminococcaceae
Genus:unclassified Ruminococcaceae
Family:Ruminococcaceae
Order:Clostridiales
Class:Clostridia
Phylum:Firmicutes

 

Gut outflow:1

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00450 - Selenocompound metabolism

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00710 - Carbon fixation in photosynthetic organisms

ko00970 - Aminoacyl-tRNA biosynthesis

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KEGG modules

M00002 - Glycolysis, core module involving three-carbon compounds

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00140 - C1-unit interconversion, prokaryotes

M00157 - F-type ATPase, prokaryotes and chloroplasts

M00159 - V-type ATPase, prokaryotes

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00627 - beta-Lactam resistance, Bla system

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00705 - Multidrug resistance, efflux pump MepA

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Antibiotic resistance

erm

tetM

van

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1433.mat