Species: | unclassified Collinsella |
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Genus: | Collinsella |
Family: | Coriobacteriaceae |
Order: | Coriobacteriales |
Class: | Coriobacteriia |
Phylum: | Actinobacteria |
Disease Association: |
Atherosclerosis (ES=0.369901) |
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In the linked pathways:
red=enriched, blue=depleted
ko00052 - Galactose metabolism
ko00250 - Alanine, aspartate and glutamate metabolism
ko00300 - Lysine biosynthesis
ko00450 - Selenocompound metabolism
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00511 - Other glycan degradation
ko00550 - Peptidoglycan biosynthesis
ko00670 - One carbon pool by folate
ko00970 - Aminoacyl-tRNA biosynthesis
ko03030 - DNA replication
ko03060 - Protein export
ko03430 - Mismatch repair
ko03440 - Homologous recombination
M00005 - PRPP biosynthesis, ribose 5P => PRPP
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
M00015 - Proline biosynthesis, glutamate => proline
M00017 - Methionine biosynthesis, apartate => homoserine => methionine
M00018 - Threonine biosynthesis, aspartate => homoserine => threonine
M00020 - Serine biosynthesis, glycerate-3P => serine
M00022 - Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
M00049 - Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00053 - Pyrimidine deoxyribonuleotide biosynthesis, CDP/CTP => dCDP/dCTP,dTDP/dTTP
M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway
M00115 - NAD biosynthesis, aspartate => NAD
M00140 - C1-unit interconversion, prokaryotes
M00157 - F-type ATPase, prokaryotes and chloroplasts
M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose
M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00844 - Arginine biosynthesis, ornithine => arginine
M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine
Undetected
Undetected
Undetected
MATLAB species model file: msp_1436.mat