| Species: | unclassified Clostridium |
|---|---|
| Genus: | Clostridium |
| Family: | Clostridiaceae |
| Order: | Clostridiales |
| Class: | Clostridia |
| Phylum: | Firmicutes |
| Gut outflow: | 1 |
|---|
In the linked pathways:
red=enriched, blue=depleted
ko00290 - Valine, leucine and isoleucine biosynthesis
ko00450 - Selenocompound metabolism
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00500 - Starch and sucrose metabolism
ko00511 - Other glycan degradation
ko00520 - Amino sugar and nucleotide sugar metabolism
ko00521 - Streptomycin biosynthesis
ko00550 - Peptidoglycan biosynthesis
ko00620 - Pyruvate metabolism
ko00670 - One carbon pool by folate
ko00770 - Pantothenate and CoA biosynthesis
ko00970 - Aminoacyl-tRNA biosynthesis
ko03430 - Mismatch repair
ko03440 - Homologous recombination
M00005 - PRPP biosynthesis, ribose 5P => PRPP
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00015 - Proline biosynthesis, glutamate => proline
M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00061 - D-Glucuronate degradation
M00086 - beta-Oxidation, acyl-CoA synthesis
M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
M00115 - NAD biosynthesis, aspartate => NAD
M00119 - Pantothenate biosynthesis, valine/L-aspartate => pantothenate
M00134 - Polyamine biosynthesis, arginine => ornithine => putrescine
M00157 - F-type ATPase, prokaryotes and chloroplasts
M00432 - Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose
M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
M00627 - beta-Lactam resistance, Bla system
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00705 - Multidrug resistance, efflux pump MepA
M00793 - dTDP-L-rhamnose biosynthesis
M00844 - Arginine biosynthesis, ornithine => arginine
M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine
Undetected
Undetected
Undetected
Undetected
MATLAB species model file: msp_1479.mat
