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unclassified Clostridiales 4

Taxonomy

Species:unclassified Clostridiales 4
Genus:unclassified Clostridiales 4
Family:unclassified Clostridiales 4
Order:Clostridiales
Class:Clostridia
Phylum:Firmicutes

 

Region Enrichment:Peru, United Republic of Tanzania

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


0%10%20%30%40%50%60%70%80%90%100%United Republic of Tanzania (27 samples)Fiji (193 samples)Madagascar (112 samples)Sweden (56 samples)Denmark (114 samples)Peru (36 samples)Germany (88 samples)Mongolia (110 samples)France (61 samples)United States of America (629 samples)China (730 samples)United Kingdom (259 samples)India (110 samples)Austria (63 samples)Finland (4 samples)Italy (63 samples)Japan (146 samples)Luxembourg (52 samples)Spain (14 samples)Thailand (15 samples)HighMediumLow

Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


0%10%20%30%40%50%60%70%80%90%100%CRC (hgma44, 22 samples)Colon adenoma (hgma408, 27 samples)T2D (hgma53, 131 samples)Renal cancer (hgma41, 101 samples)T2D (hgma403, 53 samples)Atherosclerosis (hgma01, 12 samples)Parkinson's disease (hgma08, 31 samples)CRC (hgma414, 30 samples)NAFLD (hgma40, 73 samples)Obesity (hgma25, 164 samples)CRC (hgma399, 53 samples)Colon adenoma (hgma401, 42 samples)Lung cancer (hgma26, 118 samples)Ulcerative colitis (hgma404, 21 samples)Chronic fatigue syndrome (hgma34, 50 samples)Rheumatoid arthritis (hgma31, 135 samples)CRC (hgma412, 46 samples)CRC (hgma46, 61 samples)Acute diarrhea (hgma48, 10 samples)Behcet's disease (hgma52, 24 samples)Colon adenoma (hgma400, 47 samples)Colon adenoma (hgma407, 40 samples)CRC (hgma11, 52 samples)CRC (hgma413, 74 samples)CRC (hgma415, 38 samples)CRC (hgma45, 158 samples)Crohn's disease (hgma06, 67 samples)Crohn's disease (hgma17, 4 samples)Cvd (hgma10, 214 samples)GDM (hgma12, 18 samples)IGT (hgma14, 49 samples)Liver cirrhosis (hgma20, 123 samples)Liver cirrhosis (hgma300, 90 samples)Melanoma (hgma03, 44 samples)NAFLD (hgma07, 86 samples)SPA (hgma09, 97 samples)T1D (hgma21, 4 samples)T1D (hgma35, 42 samples)T2D (hgma02, 183 samples)T2D (hgma406, 5 samples)VKH (hgma409, 83 samples)HighMediumLow

Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00473 - D-Alanine metabolism

ko00511 - Other glycan degradation

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KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00086 - beta-Oxidation, acyl-CoA synthesis

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

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Cazyme

GH10

GH13_39

GH130

GH16

GH2

GH28

GH3

GH32

GH33

GH36

GH37

GH38

GH63

GT2

GT4

GT5

GT8

PL21

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Antibiotic resistance

Undetected

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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