GEOGRAPHY SPECIES DISEASES ABOUT DOWNLOADS

[Clostridium] hylemonae

Taxonomy

Species:[Clostridium] hylemonae
Genus:Lachnoclostridium
Family:Lachnospiraceae
Order:Clostridiales
Class:Clostridia
Phylum:Firmicutes

 

Phenotypes

ShapeRod-shaped
Gram stainingGram+
MotilityMotile
Oxygen RequirementAnaerobe
SporulationSporulating
EcosystemHuman; Animal

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00450 - Selenocompound metabolism

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00550 - Peptidoglycan biosynthesis

ko00785 - Lipoic acid metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko02030 - Bacterial chemotaxis

ko02040 - Flagellar assembly

ko03430 - Mismatch repair

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KEGG modules

M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

M00432 - Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate

M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate

M00705 - Multidrug resistance, efflux pump MepA

M00844 - Arginine biosynthesis, ornithine => arginine

M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine

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Antibiotic resistance

Undetected

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Lanthipeptide

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Downloads

MATLAB species model file: msp_1525.mat