GEOGRAPHY SPECIES DISEASES ABOUT DOWNLOADS

Porphyromonas asaccharolytica

Taxonomy

Image of organism in genus Porphyromonas asaccharolytica
Species:Porphyromonas asaccharolytica
Genus:Porphyromonas
Family:Porphyromonadaceae
Order:Bacteroidales
Class:Bacteroidia
Phylum:Bacteroidetes

 

Disease Association:

Colorectal cancer (ES=0.326433)

Colorectal cancer (ES=0.328432)

Colorectal cancer (ES=0.339309)

Phenotypes

ShapeRod-shaped
Gram stainingGram-
MotilityNonmotile
Oxygen RequirementAnaerobe
SporulationNonsporulating
EcosystemUnclassified; Human
Ecosystem TypeUnclassified; Reproductive system

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00020 - Citrate cycle (TCA cycle)

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00521 - Streptomycin biosynthesis

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00710 - Carbon fixation in photosynthetic organisms

ko00730 - Thiamine metabolism

ko00780 - Biotin metabolism

ko00785 - Lipoic acid metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko03430 - Mismatch repair

ko03440 - Homologous recombination

Show all

KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

M00020 - Serine biosynthesis, glycerate-3P => serine

M00060 - Lipopolysaccharide biosynthesis, KDO2-lipid A

M00086 - beta-Oxidation, acyl-CoA synthesis

M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway

M00115 - NAD biosynthesis, aspartate => NAD

M00116 - Menaquinone biosynthesis, chorismate => menaquinol

M00119 - Pantothenate biosynthesis, valine/L-aspartate => pantothenate

M00122 - Cobalamin biosynthesis, cobinamide => cobalamin

M00123 - Biotin biosynthesis, pimeloyl-ACP/CoA => biotin

M00124 - Pyridoxal biosynthesis, erythrose-4P => pyridoxal-5P

M00149 - Succinate dehydrogenase, prokaryotes

M00153 - Cytochrome bd ubiquinol oxidase

M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine

M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine

M00565 - Trehalose biosynthesis, D-glucose 1P => trehalose

M00573 - Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin

M00577 - Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin

M00705 - Multidrug resistance, efflux pump MepA

M00793 - dTDP-L-rhamnose biosynthesis

Show all

Antibiotic resistance

blab1

sul

tetM

van

Virulence factor class

Undetected

Show all

Virulence factor gene

Undetected

Show all

Secondary metabolite

Undetected

Show all

Downloads

MATLAB species model file: msp_1570.mat