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unclassified Clostridiales 2

Taxonomy

Species:unclassified Clostridiales 2
Genus:unclassified Clostridiales 2
Family:unclassified Clostridiales 2
Order:Clostridiales
Class:Clostridia
Phylum:Firmicutes

 

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


0%10%20%30%40%50%60%70%80%90%100%Finland (4 samples)United Kingdom (259 samples)Denmark (114 samples)Austria (63 samples)Italy (63 samples)China (730 samples)Fiji (193 samples)France (61 samples)Germany (88 samples)India (110 samples)Japan (146 samples)Luxembourg (52 samples)Madagascar (112 samples)Mongolia (110 samples)Peru (36 samples)Spain (14 samples)Sweden (56 samples)Thailand (15 samples)United Republic of Tanzania (27 samples)United States of America (629 samples)HighMediumLow

Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


0%10%20%30%40%50%60%70%80%90%100%IGT (hgma14, 49 samples)T2D (hgma53, 131 samples)Obesity (hgma25, 164 samples)Chronic fatigue syndrome (hgma34, 50 samples)Lung cancer (hgma26, 118 samples)Acute diarrhea (hgma48, 10 samples)Atherosclerosis (hgma01, 12 samples)Behcet's disease (hgma52, 24 samples)Colon adenoma (hgma400, 47 samples)Colon adenoma (hgma401, 42 samples)Colon adenoma (hgma407, 40 samples)Colon adenoma (hgma408, 27 samples)CRC (hgma11, 52 samples)CRC (hgma399, 53 samples)CRC (hgma412, 46 samples)CRC (hgma413, 74 samples)CRC (hgma414, 30 samples)CRC (hgma415, 38 samples)CRC (hgma44, 22 samples)CRC (hgma45, 158 samples)CRC (hgma46, 61 samples)Crohn's disease (hgma06, 67 samples)Crohn's disease (hgma17, 4 samples)Cvd (hgma10, 214 samples)GDM (hgma12, 18 samples)Liver cirrhosis (hgma20, 123 samples)Liver cirrhosis (hgma300, 90 samples)Melanoma (hgma03, 44 samples)NAFLD (hgma07, 86 samples)NAFLD (hgma40, 73 samples)Parkinson's disease (hgma08, 31 samples)Renal cancer (hgma41, 101 samples)Rheumatoid arthritis (hgma31, 135 samples)SPA (hgma09, 97 samples)T1D (hgma21, 4 samples)T1D (hgma35, 42 samples)T2D (hgma02, 183 samples)T2D (hgma403, 53 samples)T2D (hgma406, 5 samples)Ulcerative colitis (hgma404, 21 samples)VKH (hgma409, 83 samples)HighMediumLow

Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00061 - Fatty acid biosynthesis

ko00473 - D-Alanine metabolism

ko00550 - Peptidoglycan biosynthesis

ko00970 - Aminoacyl-tRNA biosynthesis

ko03430 - Mismatch repair

ko03440 - Homologous recombination

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KEGG modules

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00086 - beta-Oxidation, acyl-CoA synthesis

M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

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Cazyme

CBM50

GH13_39

GH13_5

GH133

GH144

GH15

GH23

GH25

GH3

GH57

GH73

GH94

GT2

GT28

GT35

GT4

GT51

GT84

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Antibiotic resistance

Undetected

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Non-ribosomal peptide synthetase (NRPS)

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