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Oxalobacter formigenes 2

Taxonomy

Image of organism in genus Oxalobacter formigenes 2
Species:Oxalobacter formigenes 2
Genus:Oxalobacter
Family:Oxalobacteraceae
Order:Burkholderiales
Class:Betaproteobacteria
Phylum:Proteobacteria

 

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00471 - D-Glutamine and D-glutamate metabolism

ko00521 - Streptomycin biosynthesis

ko00540 - Lipopolysaccharide biosynthesis

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00730 - Thiamine metabolism

ko00780 - Biotin metabolism

ko00785 - Lipoic acid metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

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KEGG modules

M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

M00015 - Proline biosynthesis, glutamate => proline

M00023 - Tryptophan biosynthesis, chorismate => tryptophan

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00060 - Lipopolysaccharide biosynthesis, KDO2-lipid A

M00127 - Thiamine biosynthesis, AIR => thiamine-P/thiamine-2P

M00140 - C1-unit interconversion, prokaryotes

M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine

M00718 - Multidrug resistance, efflux pump MexAB-OprM

M00793 - dTDP-L-rhamnose biosynthesis

M00844 - Arginine biosynthesis, ornithine => arginine

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Antibiotic resistance

Undetected

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1631.mat