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unclassified Phascolarctobacterium

Taxonomy

Image of organism in genus unclassified Phascolarctobacterium
Species:unclassified Phascolarctobacterium
Genus:Phascolarctobacterium
Family:Acidaminococcaceae
Order:Acidaminococcales
Class:Negativicutes
Phylum:Firmicutes

 

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00300 - Lysine biosynthesis

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00540 - Lipopolysaccharide biosynthesis

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00780 - Biotin metabolism

ko03430 - Mismatch repair

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KEGG modules

M00015 - Proline biosynthesis, glutamate => proline

M00063 - CMP-KDO biosynthesis

M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE

M00123 - Biotin biosynthesis, pimeloyl-ACP/CoA => biotin

M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine

M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

M00573 - Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin

M00577 - Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin

M00642 - Multidrug resistance, efflux pump MexJK-OprM

M00705 - Multidrug resistance, efflux pump MepA

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Cazyme

Antibiotic resistance

aac6

blac

qnr

tetM

van

Virulence factor class

Regulation of gene expression

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Virulence factor gene

RNA polymerase sigma factor RpoD (ID:Rv2703)

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1691.mat