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Raoultella ornithinolytica

Taxonomy

Image of organism in genus Raoultella ornithinolytica
Species:Raoultella ornithinolytica
Genus:Raoultella
Family:Enterobacteriaceae
Order:Enterobacterales
Class:Gammaproteobacteria
Phylum:Proteobacteria

 

Gut outflow:1

Phenotypes

Gram stainingGram-
EcosystemUnclassified; Human; Terrestrial; Animal; Plants; Vertebrates
Ecosystem TypeUnclassified; Soil; Nematoda; Circulatory system

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00473 - D-Alanine metabolism

ko00710 - Carbon fixation in photosynthetic organisms

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KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

M00008 - Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate

M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

M00086 - beta-Oxidation, acyl-CoA synthesis

M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE

M00153 - Cytochrome bd ubiquinol oxidase

M00157 - F-type ATPase, prokaryotes and chloroplasts

M00417 - Cytochrome o ubiquinol oxidase

M00550 - Ascorbate degradation, ascorbate => D-xylulose-5P

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00718 - Multidrug resistance, efflux pump MexAB-OprM

M00745 - Imipenem resistance, repression of porin OprD

M00761 - Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N

M00844 - Arginine biosynthesis, ornithine => arginine

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Antibiotic resistance

tetM

Virulence factor class

Adherence

Adhesion

Cell motility

Cell-to-cell spread

Chaperone

Escape from the phagosome

Intracellular survival and replication

Invasion

Secretion

Virulence

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Virulence factor gene

16 kDa heat shock protein A (ID:SL1344_3776)

16 kDa heat shock protein B (ID:c4606)

2-ketobutyrate formate-lyase (EC 2.3.1.-) @ Pyruvate formate-lyase (EC 2.3.1.54) (ID:Z4466)

Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ID:STM14_4260)

BarA-associated response regulator UvrY (= GacA = SirA) (ID:SL1344_1877)

CFA/I fimbrial major subunit (ID:Z0360)

Chorismate synthase (EC 4.2.3.5) (ID:t0480)

Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) (ID:SL1344_0436)

Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (ID:c1081)

Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) @ Dipeptide chemoreceptor (ID:c4361)

FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) (ID:STM3453)

FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) (ID:STM474_3621)

Formate efflux transporter FocA (ID:SL1344_0911)

GTP-binding and nucleic acid-binding protein YchF (ID:c1661)

Homoserine O-succinyltransferase (EC 2.3.1.46) (ID:SL1344_4117)

HtrA protease/chaperone protein (ID:SF660363_0094)

Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I (ID:SEN2801)

Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain (ID:STM2511)

Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (ID:SL1344_1747)

Low-affinity inorganic phosphate transporter (ID:Z4341)

Periplasmic chaperone of outer membrane proteins Skp @ Outer membrane protein H precursor (ID:SF2457T_4958)

Periplasmic thiol:disulfide interchange protein DsbA (ID:SFV_3641)

RNA polymerase sigma factor RpoS (ID:SEN2763)

Stringent starvation protein A (ID:STM14_4033)

Transketolase (EC 2.2.1.1) (ID:c3520)

Trk potassium uptake system protein TrkA (ID:Z4660)

Uncharacterized ferredoxin-like protein YfhL (ID:SL1344_2538)

Uncharacterized protein YjaG (ID:SL1344_4108)

Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.33) (ID:S3902)

UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (ID:S1322)

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Secondary metabolite

Undetected

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