GEOGRAPHY SPECIES DISEASES ABOUT DOWNLOADS

unclassified Clostridiales Family XIII. Incertae Sedis

Taxonomy

Species:unclassified Clostridiales Family XIII. Incertae Sedis
Genus:unclassified Clostridiales Family XIII. Incertae Sedis
Family:Clostridiales Family XIII. Incertae Sedis
Order:unclassified Tissierellia 3
Class:Tissierellia 3
Phylum:Firmicutes

 

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00250 - Alanine, aspartate and glutamate metabolism

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00300 - Lysine biosynthesis

ko00340 - Histidine metabolism

ko00450 - Selenocompound metabolism

ko00471 - D-Glutamine and D-glutamate metabolism

ko00472 - D-Arginine and D-ornithine metabolism

ko00473 - D-Alanine metabolism

ko00550 - Peptidoglycan biosynthesis

ko00620 - Pyruvate metabolism

ko00670 - One carbon pool by folate

ko00730 - Thiamine metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko03430 - Mismatch repair

Show all

KEGG modules

M00002 - Glycolysis, core module involving three-carbon compounds

M00015 - Proline biosynthesis, glutamate => proline

M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

M00020 - Serine biosynthesis, glycerate-3P => serine

M00021 - Cysteine biosynthesis, serine => cysteine

M00033 - Ectoine biosynthesis, aspartate => ectoine

M00045 - Histidine degradation, histidine => N-formiminoglutamate => glutamate

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00086 - beta-Oxidation, acyl-CoA synthesis

M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway

M00119 - Pantothenate biosynthesis, valine/L-aspartate => pantothenate

M00122 - Cobalamin biosynthesis, cobinamide => cobalamin

M00157 - F-type ATPase, prokaryotes and chloroplasts

M00159 - V-type ATPase, prokaryotes

M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine

M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00627 - beta-Lactam resistance, Bla system

M00652 - Vancomycin resistance, D-Ala-D-Ser type

M00705 - Multidrug resistance, efflux pump MepA

M00844 - Arginine biosynthesis, ornithine => arginine

Show all

Cazyme

Antibiotic resistance

aph

blab1

erm

tetM

van

Virulence factor class

Undetected

Show all

Virulence factor gene

Undetected

Show all

Secondary metabolite

Undetected

Show all

Downloads

MATLAB species model file: msp_1840.mat