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unclassified Desulfovibrio

Taxonomy

Image of organism in genus unclassified Desulfovibrio
Species:unclassified Desulfovibrio
Genus:Desulfovibrio
Family:Desulfovibrionaceae
Order:Desulfovibrionales
Class:Deltaproteobacteria
Phylum:Proteobacteria

 

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00020 - Citrate cycle (TCA cycle)

ko00250 - Alanine, aspartate and glutamate metabolism

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00521 - Streptomycin biosynthesis

ko00550 - Peptidoglycan biosynthesis

ko00620 - Pyruvate metabolism

ko00660 - C5-Branched dibasic acid metabolism

ko00730 - Thiamine metabolism

ko00780 - Biotin metabolism

ko00785 - Lipoic acid metabolism

ko00791 - Atrazine degradation

ko00970 - Aminoacyl-tRNA biosynthesis

ko02030 - Bacterial chemotaxis

ko02040 - Flagellar assembly

ko03430 - Mismatch repair

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KEGG modules

M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

M00015 - Proline biosynthesis, glutamate => proline

M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00086 - beta-Oxidation, acyl-CoA synthesis

M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE

M00150 - Fumarate reductase, prokaryotes

M00157 - F-type ATPase, prokaryotes and chloroplasts

M00365 - C10-C20 isoprenoid biosynthesis, archaea

M00432 - Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate

M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate

M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine

M00577 - Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00596 - Dissimilatory sulfate reduction, sulfate => H2S

M00718 - Multidrug resistance, efflux pump MexAB-OprM

M00793 - dTDP-L-rhamnose biosynthesis

M00844 - Arginine biosynthesis, ornithine => arginine

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Antibiotic resistance

Undetected

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1848.mat