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unclassified Lachnospiraceae

Taxonomy

Species:unclassified Lachnospiraceae
Genus:unclassified Lachnospiraceae
Family:Lachnospiraceae
Order:Clostridiales
Class:Clostridia
Phylum:Firmicutes

 

Gut outflow:0.462
Disease Association:

Melanoma (ES=1)

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


0%10%20%30%40%50%60%70%80%90%100%Sweden (56 samples)Austria (63 samples)France (61 samples)Italy (63 samples)United Kingdom (259 samples)Germany (88 samples)Japan (146 samples)Denmark (114 samples)United States of America (629 samples)China (730 samples)Fiji (193 samples)Finland (4 samples)India (110 samples)Luxembourg (52 samples)Madagascar (112 samples)Mongolia (110 samples)Peru (36 samples)Spain (14 samples)Thailand (15 samples)United Republic of Tanzania (27 samples)HighMediumLow

Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


0%10%20%30%40%50%60%70%80%90%100%IGT (hgma14, 49 samples)Melanoma (hgma03, 44 samples)Atherosclerosis (hgma01, 12 samples)CRC (hgma399, 53 samples)Lung cancer (hgma26, 118 samples)CRC (hgma412, 46 samples)CRC (hgma46, 61 samples)CRC (hgma44, 22 samples)T2D (hgma403, 53 samples)NAFLD (hgma07, 86 samples)Colon adenoma (hgma407, 40 samples)CRC (hgma413, 74 samples)T2D (hgma53, 131 samples)CRC (hgma45, 158 samples)Obesity (hgma25, 164 samples)T1D (hgma35, 42 samples)Parkinson's disease (hgma08, 31 samples)CRC (hgma415, 38 samples)Chronic fatigue syndrome (hgma34, 50 samples)Colon adenoma (hgma400, 47 samples)Cvd (hgma10, 214 samples)NAFLD (hgma40, 73 samples)Colon adenoma (hgma401, 42 samples)Rheumatoid arthritis (hgma31, 135 samples)T2D (hgma02, 183 samples)Acute diarrhea (hgma48, 10 samples)Behcet's disease (hgma52, 24 samples)Colon adenoma (hgma408, 27 samples)CRC (hgma11, 52 samples)CRC (hgma414, 30 samples)Crohn's disease (hgma06, 67 samples)Crohn's disease (hgma17, 4 samples)GDM (hgma12, 18 samples)Liver cirrhosis (hgma20, 123 samples)Liver cirrhosis (hgma300, 90 samples)Renal cancer (hgma41, 101 samples)SPA (hgma09, 97 samples)T1D (hgma21, 4 samples)T2D (hgma406, 5 samples)Ulcerative colitis (hgma404, 21 samples)VKH (hgma409, 83 samples)HighMediumLow

Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00970 - Aminoacyl-tRNA biosynthesis

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KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

M00086 - beta-Oxidation, acyl-CoA synthesis

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00705 - Multidrug resistance, efflux pump MepA

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Antibiotic resistance

Undetected

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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