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unclassified Phascolarctobacterium

Taxonomy

Image of organism in genus unclassified Phascolarctobacterium
Species:unclassified Phascolarctobacterium
Genus:Phascolarctobacterium
Family:Acidaminococcaceae
Order:Acidaminococcales
Class:Negativicutes
Phylum:Firmicutes

 

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00473 - D-Alanine metabolism

ko00540 - Lipopolysaccharide biosynthesis

ko00730 - Thiamine metabolism

ko00770 - Pantothenate and CoA biosynthesis

ko00970 - Aminoacyl-tRNA biosynthesis

ko03030 - DNA replication

ko03430 - Mismatch repair

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KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

M00015 - Proline biosynthesis, glutamate => proline

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00063 - CMP-KDO biosynthesis

M00064 - ADP-L-glycero-D-manno-heptose biosynthesis

M00086 - beta-Oxidation, acyl-CoA synthesis

M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE

M00134 - Polyamine biosynthesis, arginine => ornithine => putrescine

M00365 - C10-C20 isoprenoid biosynthesis, archaea

M00432 - Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate

M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine

M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine

M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate

M00705 - Multidrug resistance, efflux pump MepA

M00844 - Arginine biosynthesis, ornithine => arginine

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Cazyme

GH33

GH73

GT28

GT51

GT83

GT9

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Antibiotic resistance

Undetected

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_2015.mat