unclassified Ruminococcaceae

Taxonomy

Species:	unclassified Ruminococcaceae
Genus:	unclassified Ruminococcaceae
Family:	Ruminococcaceae
Order:	Clostridiales
Class:	Clostridia
Phylum:	Firmicutes

Phenotypes

Abundance overview

Healthy

Mean

Median

Industrialization

Alphabetical

Presence

Abundance

Without outliers

log Abundance

Disease

Mean

Median

Alphabetical

Presence

Abundance

Without outliers

log Abundance

Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00473 - D-Alanine metabolism

ko00521 - Streptomycin biosynthesis

ko00550 - Peptidoglycan biosynthesis

ko00970 - Aminoacyl-tRNA biosynthesis

ko03430 - Mismatch repair

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KEGG modules

M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

M00020 - Serine biosynthesis, glycerate-3P => serine

M00705 - Multidrug resistance, efflux pump MepA

M00793 - dTDP-L-rhamnose biosynthesis

M00844 - Arginine biosynthesis, ornithine => arginine

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Cazyme

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Antibiotic resistance

Undetected

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Non-ribosomal peptide synthetase (NRPS)

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Downloads

MATLAB species model file: msp_2054.mat